STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB62648.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (136 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.789
SKB63161.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.769
SKB37316.1
Thioredoxin reductase (NADPH).
  
     0.698
SKB63051.1
Bacillithiol system protein YtxJ.
  
   
 0.677
SKB74760.1
DinB superfamily protein.
  
     0.661
SKB29061.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.650
SKB51755.1
Hypothetical protein.
  
     0.604
SKB86455.1
Protein of unknown function.
  
     0.576
SKB91609.1
Protein of unknown function.
  
     0.569
SKB62643.1
Imidazolonepropionase.
       0.535
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.