STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB64812.1Gliding motility associated protien GldN. (288 aa)    
Predicted Functional Partners:
SKB64822.1
Gliding motility-associated protein GldM.
 
   
 0.969
SKB64836.1
Gliding motility-associated protein GldL.
 
   
 0.934
SKB64849.1
Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529.
 
   
 0.900
SKB64876.1
Protein of unknown function.
 
     0.872
SKB67010.1
Gliding motility-associated lipoprotein GldJ/gliding motility-associated lipoprotein GldJ,TIGR03530.
 
   
 0.819
SKB64734.1
Tetratricopeptide repeat-containing protein; Manually curated.
  
   
 0.804
SKB28457.1
Probable protein-translocating porin PorT.
  
   
 0.802
SKB75699.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.801
SKB79915.1
Cell surface protein SprA.
  
   
 0.793
SKB73760.1
Gliding motility-associated lipoprotein GldH.
  
   
 0.774
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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