STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66131.1Protein of unknown function. (171 aa)    
Predicted Functional Partners:
SKB72464.1
Hypothetical protein.
  
     0.774
SKB88997.1
Gliding motility-associated protein GldC.
  
     0.769
SKB51755.1
Hypothetical protein.
  
     0.768
SKB88732.1
Acyl-CoA reductase (LuxC).
  
     0.733
SKB88468.1
GH3 auxin-responsive promoter.
  
     0.714
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.697
SKB66090.1
Protein of unknown function.
       0.643
SKB66141.1
Peptidyl-prolyl cis-trans isomerase D.
       0.637
SKB66015.1
Protein of unknown function.
 
     0.632
SKB28505.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.627
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.