STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66637.1Glycosyl transferase family 2. (250 aa)    
Predicted Functional Partners:
SKB66646.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.951
SKB66686.1
Glycosyl transferase family 2.
 
  
  0.724
SKB88502.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
  
  0.577
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
  0.560
SKB93136.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.495
SKB66916.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.468
SKB36320.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
     
 0.466
SKB82355.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.418
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.