STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66703.1Cytochrome C oxidase, cbb3-type, subunit III. (766 aa)    
Predicted Functional Partners:
SKB29839.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SKB89323.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
 
 0.854
SKB35334.1
Cytochrome c.
 
 
  0.799
SKB66756.1
Methyltransferase domain-containing protein.
       0.732
SKB37614.1
Cytochrome b6-f complex iron-sulfur subunit.
   
  0.691
SKB62539.1
Hypothetical protein.
   
  0.691
SKB66692.1
Acetyl esterase/lipase.
  
    0.691
SKB52579.1
D-lactate dehydrogenase.
   
 0.680
SKB65307.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.659
SKB92166.1
Hypothetical protein.
 
  
  0.659
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.