STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB69337.1ATP-binding cassette, subfamily B. (584 aa)    
Predicted Functional Partners:
SKB52303.1
ATP-binding cassette, subfamily B.
 
 
 
0.923
SKB31273.1
Putative ABC transport system ATP-binding protein.
 
    
0.740
SKB69358.1
Phospholipase_D-nuclease N-terminal.
       0.693
SKB72543.1
ABC-type multidrug transport system, ATPase component.
  
  0.636
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
    0.622
SKB69592.1
Phospholipase_D-nuclease N-terminal.
       0.590
SKB69483.1
Phospholipase_D-nuclease N-terminal.
       0.564
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.543
SKB86776.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
   
   0.503
SKB69266.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.497
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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