STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB71329.1Protein of unknown function. (280 aa)    
Predicted Functional Partners:
SKB74801.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
     0.759
SKB74783.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.726
SKB83711.1
Signal transduction histidine kinase.
    
 0.685
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.660
SKB51755.1
Hypothetical protein.
  
     0.605
SKB66131.1
Protein of unknown function.
  
     0.594
SKB71341.1
Four helix bundle sensory module for signal transduction.
       0.594
SKB89700.1
Signal transduction histidine kinase.
    
 0.578
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.534
SKB63161.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.498
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
Server load: low (24%) [HD]