Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKB40749.1 | SKB74481.1 | SAMN05661099_1182 | SAMN05661099_2556 | Hypothetical protein. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.452 |
| SKB42586.1 | SKB43014.1 | SAMN05661099_1327 | SAMN05661099_1377 | DNA polymerase-3 subunit epsilon. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.512 |
| SKB42586.1 | SKB74481.1 | SAMN05661099_1327 | SAMN05661099_2556 | DNA polymerase-3 subunit epsilon. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.495 |
| SKB43014.1 | SKB42586.1 | SAMN05661099_1377 | SAMN05661099_1327 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA polymerase-3 subunit epsilon. | 0.512 |
| SKB43014.1 | SKB74481.1 | SAMN05661099_1377 | SAMN05661099_2556 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.538 |
| SKB43014.1 | SKB94289.1 | SAMN05661099_1377 | SAMN05661099_3608 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase Rpb6. | 0.993 |
| SKB43014.1 | rpoA | SAMN05661099_1377 | SAMN05661099_1777 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| SKB43014.1 | rpoB | SAMN05661099_1377 | SAMN05661099_0124 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| SKB43014.1 | rpoC | SAMN05661099_1377 | SAMN05661099_0125 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
| SKB68997.1 | SKB74481.1 | SAMN05661099_2273 | SAMN05661099_2556 | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.584 |
| SKB74440.1 | SKB74481.1 | SAMN05661099_2554 | SAMN05661099_2556 | N4-(beta-N-acetylglucosaminyl)-L-asparaginase. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.601 |
| SKB74440.1 | cutC | SAMN05661099_2554 | SAMN05661099_2555 | N4-(beta-N-acetylglucosaminyl)-L-asparaginase. | Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | 0.899 |
| SKB74481.1 | SKB40749.1 | SAMN05661099_2556 | SAMN05661099_1182 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Hypothetical protein. | 0.452 |
| SKB74481.1 | SKB42586.1 | SAMN05661099_2556 | SAMN05661099_1327 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | DNA polymerase-3 subunit epsilon. | 0.495 |
| SKB74481.1 | SKB43014.1 | SAMN05661099_2556 | SAMN05661099_1377 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.538 |
| SKB74481.1 | SKB68997.1 | SAMN05661099_2556 | SAMN05661099_2273 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.584 |
| SKB74481.1 | SKB74440.1 | SAMN05661099_2556 | SAMN05661099_2554 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | N4-(beta-N-acetylglucosaminyl)-L-asparaginase. | 0.601 |
| SKB74481.1 | SKB94289.1 | SAMN05661099_2556 | SAMN05661099_3608 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase Rpb6. | 0.538 |
| SKB74481.1 | cutC | SAMN05661099_2556 | SAMN05661099_2555 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | 0.601 |
| SKB74481.1 | rpoA | SAMN05661099_2556 | SAMN05661099_1777 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.538 |
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