STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB75115.1L-asparaginase. (282 aa)    
Predicted Functional Partners:
SKB75103.1
Cyanophycinase; Belongs to the peptidase S51 family.
 
  
 0.915
SKB62901.1
Beta-aspartyl-peptidase (threonine type).
  
  
 
0.909
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.884
SKB62984.1
L-asparaginase.
     
 0.865
SKB65916.1
Arginase family enzyme; Belongs to the arginase family.
   
 
  0.756
SKB75071.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
 
   
 0.685
SKB75127.1
Hypothetical protein.
 
     0.587
SKB62867.1
Cyanophycinase; Belongs to the peptidase S51 family.
  
 0.568
SKB93116.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.526
SKB93314.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.526
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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