Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB28893.1 | SKB28943.1 | SAMN05661099_0212 | SAMN05661099_0222 | Tetratricopeptide repeat-containing protein. | TPR repeat-containing protein. | 0.850 |
SKB28893.1 | SKB36221.1 | SAMN05661099_0212 | SAMN05661099_0877 | Tetratricopeptide repeat-containing protein. | Molecular chaperone HtpG. | 0.720 |
SKB28893.1 | SKB48469.1 | SAMN05661099_0212 | SAMN05661099_1616 | Tetratricopeptide repeat-containing protein. | Response regulator receiver domain-containing protein. | 0.785 |
SKB28893.1 | SKB75605.1 | SAMN05661099_0212 | SAMN05661099_2637 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.840 |
SKB28893.1 | SKB79757.1 | SAMN05661099_0212 | SAMN05661099_2763 | Tetratricopeptide repeat-containing protein. | Tfp pilus assembly protein PilF. | 0.680 |
SKB28893.1 | SKB83711.1 | SAMN05661099_0212 | SAMN05661099_3040 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.994 |
SKB28893.1 | SKB88690.1 | SAMN05661099_0212 | SAMN05661099_3268 | Tetratricopeptide repeat-containing protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.906 |
SKB28893.1 | SKB89700.1 | SAMN05661099_0212 | SAMN05661099_3364 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.852 |
SKB28893.1 | alaS | SAMN05661099_0212 | SAMN05661099_1279 | Tetratricopeptide repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.897 |
SKB28893.1 | ribBA | SAMN05661099_0212 | SAMN05661099_3093 | Tetratricopeptide repeat-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.540 |
SKB28943.1 | SKB28893.1 | SAMN05661099_0222 | SAMN05661099_0212 | TPR repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.850 |
SKB28943.1 | SKB36221.1 | SAMN05661099_0222 | SAMN05661099_0877 | TPR repeat-containing protein. | Molecular chaperone HtpG. | 0.764 |
SKB28943.1 | SKB48469.1 | SAMN05661099_0222 | SAMN05661099_1616 | TPR repeat-containing protein. | Response regulator receiver domain-containing protein. | 0.940 |
SKB28943.1 | SKB75605.1 | SAMN05661099_0222 | SAMN05661099_2637 | TPR repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.768 |
SKB28943.1 | SKB79757.1 | SAMN05661099_0222 | SAMN05661099_2763 | TPR repeat-containing protein. | Tfp pilus assembly protein PilF. | 0.610 |
SKB28943.1 | SKB83711.1 | SAMN05661099_0222 | SAMN05661099_3040 | TPR repeat-containing protein. | Signal transduction histidine kinase. | 0.969 |
SKB28943.1 | SKB88690.1 | SAMN05661099_0222 | SAMN05661099_3268 | TPR repeat-containing protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.943 |
SKB28943.1 | SKB89700.1 | SAMN05661099_0222 | SAMN05661099_3364 | TPR repeat-containing protein. | Signal transduction histidine kinase. | 0.944 |
SKB28943.1 | alaS | SAMN05661099_0222 | SAMN05661099_1279 | TPR repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.893 |
SKB28943.1 | ribBA | SAMN05661099_0222 | SAMN05661099_3093 | TPR repeat-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.924 |
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