STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB76691.1Phosphonopyruvate decarboxylase. (375 aa)    
Predicted Functional Partners:
SKB89849.1
Acetolactate synthase, small subunit.
  
 0.996
SKB76727.1
Phosphoenolpyruvate mutase.
 
 0.989
SKB34943.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.901
SKB76675.1
Alcohol dehydrogenase.
 
   
 0.870
SKB90074.1
Ketol-acid reductoisomerase.
  
 
 0.854
SKB51995.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.802
SKB48172.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
   
  0.791
SKB79892.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.751
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.724
SKB72944.1
Glycine/D-amino acid oxidase.
     
 0.723
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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