STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB86029.1Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (232 aa)    
Predicted Functional Partners:
SKB86054.1
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 0.999
SKB85952.1
Sulfite reductase (ferredoxin).
 
 0.998
SKB86040.1
Sulfate adenylyltransferase subunit 2.
  
 0.994
SKB85971.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.955
SKB48172.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
 
 0.915
SKB85984.1
Siroheme synthase, N-terminal domain-containing protein.
 
  
 0.906
SKB63139.1
Phosphoesterase RecJ domain-containing protein.
   
 
  0.884
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
  
 0.805
SKB82148.1
Hypothetical protein.
 
  
 0.717
SKB74238.1
Glyoxylase, beta-lactamase superfamily II.
     
 0.562
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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