Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB33601.1 | SKB34485.1 | SAMN05661099_0660 | SAMN05661099_0733 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.663 |
SKB33601.1 | SKB42842.1 | SAMN05661099_0660 | SAMN05661099_1355 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase. | 0.944 |
SKB33601.1 | SKB80532.1 | SAMN05661099_0660 | SAMN05661099_2806 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase. | 0.906 |
SKB33601.1 | SKB91030.1 | SAMN05661099_0660 | SAMN05661099_3404 | Aspartate kinase; Belongs to the aspartokinase family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.563 |
SKB33601.1 | asd | SAMN05661099_0660 | SAMN05661099_1824 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.991 |
SKB33601.1 | dapA | SAMN05661099_0660 | SAMN05661099_3340 | Aspartate kinase; Belongs to the aspartokinase family. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.761 |
SKB33601.1 | dapB | SAMN05661099_0660 | SAMN05661099_3132 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.688 |
SKB34485.1 | SKB33601.1 | SAMN05661099_0733 | SAMN05661099_0660 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.663 |
SKB34485.1 | SKB42842.1 | SAMN05661099_0733 | SAMN05661099_1355 | Homoserine dehydrogenase. | Diaminopimelate decarboxylase. | 0.688 |
SKB34485.1 | SKB80532.1 | SAMN05661099_0733 | SAMN05661099_2806 | Homoserine dehydrogenase. | Aspartate kinase. | 0.935 |
SKB34485.1 | asd | SAMN05661099_0733 | SAMN05661099_1824 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.977 |
SKB34485.1 | dapA | SAMN05661099_0733 | SAMN05661099_3340 | Homoserine dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.920 |
SKB42842.1 | SKB33601.1 | SAMN05661099_1355 | SAMN05661099_0660 | Diaminopimelate decarboxylase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.944 |
SKB42842.1 | SKB34485.1 | SAMN05661099_1355 | SAMN05661099_0733 | Diaminopimelate decarboxylase. | Homoserine dehydrogenase. | 0.688 |
SKB42842.1 | SKB80532.1 | SAMN05661099_1355 | SAMN05661099_2806 | Diaminopimelate decarboxylase. | Aspartate kinase. | 0.861 |
SKB42842.1 | asd | SAMN05661099_1355 | SAMN05661099_1824 | Diaminopimelate decarboxylase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.718 |
SKB42842.1 | dapA | SAMN05661099_1355 | SAMN05661099_3340 | Diaminopimelate decarboxylase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.829 |
SKB42842.1 | dapB | SAMN05661099_1355 | SAMN05661099_3132 | Diaminopimelate decarboxylase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.829 |
SKB80532.1 | SKB33601.1 | SAMN05661099_2806 | SAMN05661099_0660 | Aspartate kinase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.906 |
SKB80532.1 | SKB34485.1 | SAMN05661099_2806 | SAMN05661099_0733 | Aspartate kinase. | Homoserine dehydrogenase. | 0.935 |
page 1 of 3