STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB93561.1Glycosyltransferase, GT2 family. (258 aa)    
Predicted Functional Partners:
SKB66646.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.719
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 
  0.711
SKB93526.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.671
SKB93550.1
Hypothetical protein.
       0.648
SKB93518.1
Hypothetical protein.
       0.644
SKB70033.1
Glycosyltransferase involved in cell wall bisynthesis; Manually curated.
  
     0.634
SKB93579.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.573
SKB93568.1
Methyltransferase domain-containing protein.
       0.568
SKB93168.1
Glycosyltransferase involved in cell wall bisynthesis; Manually curated.
  
     0.539
SKB93628.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.520
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.