STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB93687.1UDP-N-acetylglucosamine 2-epimerase/UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing,TIGR03568. (388 aa)    
Predicted Functional Partners:
SKB93699.1
N-acetylneuraminate synthase.
 
 0.995
SKB93676.1
N-acylneuraminate cytidylyltransferase.
  
 0.985
SKB62388.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.940
SKB93858.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.938
SKB63555.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.927
SKB93767.1
UDP-glucose 4-epimerase.
 
 
 0.846
SKB93710.1
Hypothetical protein.
  
    0.803
SKB93736.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
 
     0.791
SKB93725.1
Hypothetical protein.
       0.773
SKB93628.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.766
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.