Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB47908.1 | SKB94337.1 | SAMN05661099_1600 | SAMN05661099_3611 | DNA polymerase V. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.718 |
SKB47908.1 | recA | SAMN05661099_1600 | SAMN05661099_3099 | DNA polymerase V. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.995 |
SKB94278.1 | SKB94289.1 | SAMN05661099_3607 | SAMN05661099_3608 | Beta-barrel assembly machine subunit BamD. | RNA polymerase Rpb6. | 0.989 |
SKB94278.1 | SKB94303.1 | SAMN05661099_3607 | SAMN05661099_3609 | Beta-barrel assembly machine subunit BamD. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.718 |
SKB94278.1 | SKB94326.1 | SAMN05661099_3607 | SAMN05661099_3610 | Beta-barrel assembly machine subunit BamD. | Protein of unknown function. | 0.825 |
SKB94278.1 | SKB94337.1 | SAMN05661099_3607 | SAMN05661099_3611 | Beta-barrel assembly machine subunit BamD. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.511 |
SKB94289.1 | SKB94278.1 | SAMN05661099_3608 | SAMN05661099_3607 | RNA polymerase Rpb6. | Beta-barrel assembly machine subunit BamD. | 0.989 |
SKB94289.1 | SKB94303.1 | SAMN05661099_3608 | SAMN05661099_3609 | RNA polymerase Rpb6. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.741 |
SKB94289.1 | SKB94326.1 | SAMN05661099_3608 | SAMN05661099_3610 | RNA polymerase Rpb6. | Protein of unknown function. | 0.814 |
SKB94289.1 | SKB94337.1 | SAMN05661099_3608 | SAMN05661099_3611 | RNA polymerase Rpb6. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.514 |
SKB94289.1 | SKB94345.1 | SAMN05661099_3608 | SAMN05661099_3612 | RNA polymerase Rpb6. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.499 |
SKB94303.1 | SKB94278.1 | SAMN05661099_3609 | SAMN05661099_3607 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Beta-barrel assembly machine subunit BamD. | 0.718 |
SKB94303.1 | SKB94289.1 | SAMN05661099_3609 | SAMN05661099_3608 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | RNA polymerase Rpb6. | 0.741 |
SKB94303.1 | SKB94326.1 | SAMN05661099_3609 | SAMN05661099_3610 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Protein of unknown function. | 0.946 |
SKB94303.1 | SKB94337.1 | SAMN05661099_3609 | SAMN05661099_3611 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.842 |
SKB94303.1 | SKB94345.1 | SAMN05661099_3609 | SAMN05661099_3612 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.488 |
SKB94326.1 | SKB94278.1 | SAMN05661099_3610 | SAMN05661099_3607 | Protein of unknown function. | Beta-barrel assembly machine subunit BamD. | 0.825 |
SKB94326.1 | SKB94289.1 | SAMN05661099_3610 | SAMN05661099_3608 | Protein of unknown function. | RNA polymerase Rpb6. | 0.814 |
SKB94326.1 | SKB94303.1 | SAMN05661099_3610 | SAMN05661099_3609 | Protein of unknown function. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.946 |
SKB94326.1 | SKB94337.1 | SAMN05661099_3610 | SAMN05661099_3611 | Protein of unknown function. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.743 |
page 1 of 3