STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_076910Leucine zipper protein, putative. (195 aa)    
Predicted Functional Partners:
TVAG_179860
ATP-dependent RNA helicase p47, putative; Belongs to the DEAD box helicase family.
    
 
 0.692
TVAG_009990
Regulator of G protein, putative.
      
 0.579
TVAG_361430
Ydr279_N domain-containing protein.
   
  
 0.568
TVAG_070140
Uncharacterized protein.
      
 0.562
TVAG_233010
Uncharacterized protein.
      
 0.562
TVAG_186100
Uncharacterized protein.
      
 0.557
TVAG_151700
Uncharacterized protein.
      
 0.556
TVAG_058400
Uncharacterized protein.
      
 0.556
TVAG_256850
S-adenosylmethionine-dependent methyltransferase, putative.
      
 0.551
TVAG_029510
Methyltransferase, putative.
      
 0.551
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.