STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_475600Cell surface protein, putative. (280 aa)    
Predicted Functional Partners:
TVAG_080130
Leucine Rich Repeat family protein.
  
     0.506
TVAG_103970
Leucine Rich Repeat family protein.
  
     0.501
TVAG_422400
Leucine Rich Repeat family protein.
  
     0.500
TVAG_090430
Surface antigen BspA-like.
  
     0.497
TVAG_471830
Surface antigen Bsp, putative.
  
     0.496
TVAG_219830
Surface antigen BspA-like.
  
     0.494
TVAG_007210
Uncharacterized protein.
  
     0.494
TVAG_219850
Surface antigen BspA-like.
  
     0.489
TVAG_264250
Leucine Rich Repeat family protein.
  
     0.489
TVAG_282805
Surface antigen BspA-like.
  
     0.487
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.