STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_035070Ubiquitin family protein. (299 aa)    
Predicted Functional Partners:
TVAG_392610
Variant SH3 domain containing protein.
    
 0.999
TVAG_126330
U-box domain containing protein.
   
 0.939
TVAG_128250
Proteasome endopeptidase complex, putative; Belongs to the AAA ATPase family.
   
 0.934
TVAG_006170
60S ribosomal protein L19-3, putative.
   
 0.921
TVAG_438030
PCI domain containing protein.
   
 0.919
TVAG_040120
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.917
TVAG_055940
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
 0.917
TVAG_106800
Ribosomal protein S3, putative.
   
 0.916
TVAG_107660
40S ribosomal protein S29, putative.
   
 0.916
TVAG_371680
PCI domain containing protein.
   
 0.915
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.