STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_378530SNARE domain containing protein. (112 aa)    
Predicted Functional Partners:
TVAG_182300
t-SNARE coiled-coil homology domain-containing protein.
   
 0.999
TVAG_432570
SNARE protein, putative.
    
 0.999
TVAG_276220
Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.999
TVAG_280040
Uncharacterized protein.
    
 0.999
TVAG_381070
Synaptobrevin family protein; Belongs to the synaptobrevin family.
   
 0.999
TVAG_318380
SNARE domain containing protein; Belongs to the syntaxin family.
   
 0.999
TVAG_476020
ATPase, AAA family protein.
    
 0.998
TVAG_032160
t-SNARE coiled-coil homology domain-containing protein.
   
 0.997
TVAG_121700
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 0.977
TVAG_329300
Coatomer epsilon subunit family protein.
    
 0.972
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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