STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_436540Uncharacterized protein. (482 aa)    
Predicted Functional Partners:
TVAG_379530
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.999
TVAG_267590
WASH_WAHD domain-containing protein.
      
 0.676
TVAG_459140
SnoRNA binding domain containing protein.
   
  
 0.675
TVAG_081030
Type III restriction enzyme, res subunit family protein; Belongs to the DEAD box helicase family.
   
 
 0.647
TVAG_426440
Type III restriction enzyme, res subunit family protein.
      
 0.632
TVAG_325770
Type III restriction enzyme, res subunit family protein.
      
 0.632
TVAG_287330
Type III restriction enzyme, res subunit family protein.
      
 0.632
TVAG_179860
ATP-dependent RNA helicase p47, putative; Belongs to the DEAD box helicase family.
   
 
 0.603
TVAG_285080
Surp module family protein.
   
  
 0.597
TVAG_111420
RRM domain-containing protein.
   
  
 0.575
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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