STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_163700Kelch motif family protein. (1453 aa)    
Predicted Functional Partners:
TVAG_351910
RanBP1 domain containing protein.
    
 0.770
TVAG_080080
RanBP1 domain containing protein.
    
 0.770
TVAG_267850
Clan CA, family C1, cathepsin L or K-like cysteine peptidase; Belongs to the peptidase C1 family.
    
   0.695
TVAG_427120
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
    
   0.695
TVAG_098740
Skp1 family, dimerisation domain containing protein; Belongs to the SKP1 family.
    
 
 0.648
TVAG_327110
GTP-binding protein 128UP, putative.
    
   0.623
TVAG_030780
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.609
TVAG_123550
GTP-binding protein 1, putative.
    
   0.580
TVAG_146960
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.577
TVAG_062520
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.577
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.