STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_139330CCHC-type domain-containing protein. (314 aa)    
Predicted Functional Partners:
TVAG_493850
MI domain-containing protein.
   
 0.999
TVAG_447010
Pre-mRNA splicing factor, putative.
   
 0.999
TVAG_139790
Crooked neck protein-related protein.
   
 
 0.999
TVAG_206870
Pre-mRNA processing 8 protein homolog PRP8.
    
 
 0.999
TVAG_179860
ATP-dependent RNA helicase p47, putative; Belongs to the DEAD box helicase family.
   
 0.999
TVAG_316180
Uncharacterized protein.
     
 0.999
TVAG_370440
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.999
TVAG_103280
G10 protein.
    
 
 0.998
TVAG_172150
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type family protein.
     
 0.995
TVAG_206220
RRM domain-containing protein.
    
 0.995
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.