STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_301370BNR/Asp-box repeat family protein. (270 aa)    
Predicted Functional Partners:
TVAG_010780
Glycosyl hydrolase family 20, catalytic domain containing protein.
  
 
 0.780
TVAG_484030
Glycosyl hydrolase family 20, catalytic domain containing protein.
  
 
 0.780
TVAG_133440
Glycosyl hydrolase family 20, catalytic domain containing protein.
  
 
 0.780
TVAG_302140
Glycosyl hydrolase family 20, catalytic domain containing protein.
  
 
 0.780
TVAG_451400
Glycosyl hydrolase family 20, catalytic domain containing protein.
  
 
 0.780
TVAG_167010
DNA repair helicase rad25 family protein.
  
    0.654
TVAG_044250
DNA repair helicase rad25 family protein.
  
    0.654
TVAG_468020
26S proteasome non-ATPase regulatory subunit, putative.
   
  
 0.605
TVAG_365520
Glucosamine-6-phosphate isomerase family protein.
  
  
 0.518
TVAG_198060
Uncharacterized protein.
      
 0.511
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.