STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_098820Aminotransferase, classes I and II family protein. (496 aa)    
Predicted Functional Partners:
TVAG_072100
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.968
TVAG_201620
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.968
TVAG_494040
Isocitrate dehydrogenase [NADP].
  
 
 0.903
TVAG_020800
Aspartate aminotransferase.
  
 0.844
TVAG_329360
Cytochrome b5-like Heme/Steroid binding domain containing protein; Belongs to the cytochrome b5 family.
  
 
 0.804
TVAG_032980
Cytochrome b5-like Heme/Steroid binding domain containing protein; Belongs to the cytochrome b5 family.
  
 
 0.804
TVAG_274060
Cytochrome b5-like Heme/Steroid binding domain containing protein; Belongs to the cytochrome b5 family.
  
 
 0.804
TVAG_024850
Hydrolase NIT3, putative.
  
 
 0.790
TVAG_351660
Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.786
TVAG_001640
Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein.
  
 
 0.786
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.