STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_416880Preprotein translocase, SecY subunit, putative; Belongs to the SecY/SEC61-alpha family. (484 aa)    
Predicted Functional Partners:
TVAG_083260
Ribosomal protein L22, putative; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.976
TVAG_015800
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.976
TVAG_005910
Ribosomal protein L8, putative.
  
 
 0.976
TVAG_071920
40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.974
TVAG_106800
Ribosomal protein S3, putative.
  
 
 0.974
TVAG_055940
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.974
TVAG_107660
40S ribosomal protein S29, putative.
  
 
 0.974
TVAG_322520
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.962
TVAG_136320
Protein translocase gamma subunit, putative.
   
 0.961
TVAG_059250
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 0.950
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.