STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_314600DEAD/DEAH box helicase family protein. (171 aa)    
Predicted Functional Partners:
TVAG_309050
FtsJ-like methyltransferase family protein.
  
 0.962
TVAG_292010
S1 RNA binding domain containing protein.
  
 0.956
TVAG_233430
Block of proliferation protein, putative.
   
 0.947
TVAG_230750
Uncharacterized protein.
   
 0.944
TVAG_214120
Kurz protein, putative.
  
 0.943
TVAG_122840
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.942
TVAG_335860
Type III restriction enzyme, res subunit family protein.
  
0.940
TVAG_283500
Uncharacterized protein.
   
 0.938
TVAG_154760
BP28CT domain-containing protein.
   
 0.928
TVAG_020100
Uncharacterized protein.
   
 0.924
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.