STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_116230Isopentenyl-diphosphate delta-isomerase, type 1 family protein. (209 aa)    
Predicted Functional Partners:
TVAG_302660
Diphosphomevalonate decarboxylase.
  
 
 0.997
TVAG_150090
Polyprenyl synthetase family protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.986
TVAG_388030
Polyprenyl synthetase family protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.986
TVAG_353270
Polyprenyl synthetase family protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.986
TVAG_313970
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.929
TVAG_495540
Isopentenyl-diphosphate delta-isomerase, type 1 family protein.
  
  
 
0.901
TVAG_424580
Mevalonate kinase.
  
 
 0.887
TVAG_304570
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
  
 0.858
TVAG_438940
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
  
 0.858
TVAG_016150
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
  
 0.754
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.