STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_292780Uncharacterized protein. (532 aa)    
Predicted Functional Partners:
TVAG_420180
KOW motif family protein.
    
 0.941
TVAG_328410
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 0.877
TVAG_247430
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.871
TVAG_073760
Surface antigen BspA-like.
   
 0.871
TVAG_487590
Uncharacterized protein.
   
 0.871
TVAG_358100
DNA-directed RNA polymerase II largest subunit-related protein.
   
 0.871
TVAG_057470
Uncharacterized protein.
   
 0.871
TVAG_016650
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 0.842
TVAG_111540
RNA polymerase Rpb7, N-terminal domain containing protein.
    
 0.841
TVAG_345370
Nuclear cap-binding protein subunit 2.
   
 
 0.838
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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