STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_040410Leucine Rich Repeat family protein. (260 aa)    
Predicted Functional Partners:
TVAG_252400
JAB_MPN domain-containing protein.
   
 0.984
TVAG_099190
Ubiquitin family protein.
   
 0.971
TVAG_438030
PCI domain containing protein.
   
 0.969
TVAG_043930
PCI domain containing protein.
   
 0.968
TVAG_492560
PCI domain-containing protein.
   
 0.968
TVAG_131180
MGC81975 protein, putative.
    
 0.967
TVAG_371680
PCI domain containing protein.
   
 0.965
TVAG_151040
Uncharacterized protein.
   
 0.963
TVAG_279420
PCI domain-containing protein.
   
 0.963
TVAG_482240
Skp1 family, tetramerisation domain containing protein; Belongs to the SKP1 family.
   
 0.954
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.