STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_154700CULLIN_2 domain-containing protein; Belongs to the cullin family. (765 aa)    
Predicted Functional Partners:
TVAG_098740
Skp1 family, dimerisation domain containing protein; Belongs to the SKP1 family.
   
 0.956
TVAG_120660
Uncharacterized protein.
   
 0.953
TVAG_099190
Ubiquitin family protein.
    
 0.948
TVAG_101520
Surface antigen BspA-like.
    
 0.935
TVAG_318940
Ubiquitin conjugating enzyme, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.933
TVAG_150530
BTB/POZ domain containing protein.
   
 0.926
TVAG_184360
Glycerate kinase family protein.
   
 0.926
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.922
KATNAL2-2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.922
TVAG_482240
Skp1 family, tetramerisation domain containing protein; Belongs to the SKP1 family.
   
 0.912
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.