STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_208450GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (260 aa)    
Predicted Functional Partners:
TVAG_071390
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
  
 
 
0.993
TVAG_379530
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.953
TVAG_328410
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
  
 
 0.936
TVAG_494320
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
    
 
 0.935
TVAG_434510
Uncharacterized protein.
    
 
 0.933
TVAG_392610
Variant SH3 domain containing protein.
    
 0.917
TVAG_394450
RhoGEF domain containing protein.
    
 0.904
TVAG_317480
RhoGEF domain containing protein.
    
 0.904
TVAG_100830
Uncharacterized protein.
   
 0.892
TVAG_106580
Uncharacterized protein.
   
 0.892
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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