STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_286750Nuclear pore protein. (738 aa)    
Predicted Functional Partners:
TVAG_351910
RanBP1 domain containing protein.
   
 0.999
TVAG_080080
RanBP1 domain containing protein.
   
 0.999
TVAG_327680
Uncharacterized protein.
   
 0.999
TVAG_398870
Uncharacterized protein.
   
 0.997
TVAG_011300
Uncharacterized protein.
   
 0.978
TVAG_229460
Nsp1_C domain-containing protein.
   
 0.967
TVAG_456890
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.957
TVAG_158010
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.957
TVAG_303500
Nup54 domain-containing protein.
   
 0.955
TVAG_223970
Nup54 domain-containing protein.
   
 0.955
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.