STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_080230Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
TVAG_365450
RRM domain-containing protein.
   
 0.999
TVAG_426690
FHA domain containing protein.
   
 0.999
TVAG_493850
MI domain-containing protein.
   
 
 0.994
TVAG_447830
PHF5-like protein.
    
 
 0.992
TVAG_081790
PSP family protein.
    
 
 0.992
TVAG_447010
Pre-mRNA splicing factor, putative.
    
 
 0.992
TVAG_139790
Crooked neck protein-related protein.
   
 
 0.992
TVAG_103280
G10 protein.
    
 
 0.991
TVAG_151600
MFAP1 domain-containing protein.
   
   0.991
TVAG_332520
Splicing factor subunit, putative.
    
 
 0.991
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.