STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_196700Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (507 aa)    
Predicted Functional Partners:
TVAG_258770
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.897
TVAG_203330
Cytochrome b5-like Heme/Steroid binding domain containing protein; Belongs to the cytochrome b5 family.
  
 
 0.844
TVAG_457250
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.838
TVAG_473930
Asparagine synthase family protein.
  
 
 0.831
TVAG_494040
Isocitrate dehydrogenase [NADP].
  
 
 0.815
TVAG_346790
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.811
TVAG_103080
Cyclic nucleotide-binding domain containing protein.
   
 0.808
TVAG_125340
Cyclic nucleotide-binding domain containing protein.
   
 0.808
TVAG_225160
Uncharacterized protein.
  
 
 0.805
TVAG_134820
Glutaminase family protein.
     
 0.777
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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