STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_144270Myb-like DNA-binding domain containing protein. (275 aa)    
Predicted Functional Partners:
TVAG_185490
Uncharacterized protein.
    
 
 0.996
TVAG_200630
C3H1-type domain-containing protein.
    
 
 0.996
TVAG_139790
Crooked neck protein-related protein.
   
 0.969
TVAG_122280
Pre-mRNA splicing protein, putative.
   
 0.968
TVAG_412620
U-box domain-containing protein.
   
 0.968
TVAG_325830
U-box domain-containing protein.
   
 0.968
TVAG_258450
Uncharacterized protein.
   
 0.967
TVAG_216200
Cell cycle control protein, putative.
   
 0.960
TVAG_013840
Uncharacterized protein.
   
 0.957
TVAG_178720
Cell cycle control protein, putative.
    
 0.944
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.