STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_222780Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
TVAG_247110
Guanylate kinase family protein.
    
 
 0.489
TVAG_319490
Uncharacterized protein.
    
 
 0.489
TVAG_297390
Uncharacterized protein.
    
 
 0.489
TVAG_150290
Endo-alpha-mannosidase, putative.
    
 
 0.489
TVAG_117050
Uncharacterized protein.
    
 
 0.489
TVAG_268950
Leucine Rich Repeat family protein.
    
 
 0.489
TVAG_040840
Glycoprotein endo-alpha-1,2-mannosidase, putative.
    
 
 0.489
TVAG_344860
Guanylate kinase family protein.
    
 
 0.489
TVAG_375320
Uncharacterized protein.
   
 
 0.489
TVAG_441520
Guanylate kinase family protein.
    
 
 0.489
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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