STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_368250SNF2 family N-terminal domain containing protein. (1612 aa)    
Predicted Functional Partners:
TVAG_426440
Type III restriction enzyme, res subunit family protein.
    
 0.875
TVAG_325770
Type III restriction enzyme, res subunit family protein.
    
 0.875
TVAG_287330
Type III restriction enzyme, res subunit family protein.
    
 0.875
TVAG_232800
RuvB-like helicase; Belongs to the RuvB family.
    
 0.859
TVAG_328410
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 0.848
TVAG_291710
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.840
TVAG_092580
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.840
TVAG_016650
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 0.839
TVAG_117450
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.838
TVAG_190260
Ubiquitin family protein.
    
 0.837
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.