STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_243780Clan MA, family M41, FtsH endopeptidase-like metallopeptidase; Belongs to the AAA ATPase family. (533 aa)    
Predicted Functional Partners:
TVAG_015800
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.967
TVAG_233350
Clan ME, family M16, insulinase-like metallopeptidase.
  
 0.953
TVAG_119710
Clan ME, family M16, insulinase-like metallopeptidase.
  
 0.951
TVAG_006250
Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.894
TVAG_164700
Ribosomal protein S15a, putative; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.894
TVAG_005910
Ribosomal protein L8, putative.
  
 
 0.884
TVAG_243750
S1 RNA binding domain containing protein.
  
  
 0.878
TVAG_107660
40S ribosomal protein S29, putative.
   
 
 0.860
TVAG_243770
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.854
TVAG_083260
Ribosomal protein L22, putative; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.853
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.