STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_255210PC4 domain-containing protein. (96 aa)    
Predicted Functional Partners:
TVAG_494090
Symplekin_C domain-containing protein.
    
 
 0.978
TVAG_071030
Uncharacterized protein.
   
 
 0.917
TVAG_420180
KOW motif family protein.
    
 
 0.791
TVAG_324910
RRM domain-containing protein.
   
 
 0.784
TVAG_328410
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 
 0.781
TVAG_198720
Uncharacterized protein.
      
 0.728
TVAG_371310
RRM domain-containing protein.
   
 
 0.726
TVAG_016650
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.
   
 
 0.696
TVAG_468310
HIT domain containing protein.
   
  
 0.681
TVAG_229140
SSU72 protein-related protein.
   
  
 0.681
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.