STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_247920Hypothetical 45.4 kDa protein in thiaminase I 5'region-related protein. (171 aa)    
Predicted Functional Partners:
TVAG_109540
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.703
TVAG_183300
Aminotransferase, class V family protein.
  
 
 0.675
TVAG_224040
Aminotransferase, class V family protein.
  
 
 0.675
TVAG_099570
Aminotransferase, class V family protein.
  
 
 0.675
TVAG_222920
Inosine guanosine and xanthosine phosphorylase family protein.
    
 0.674
TVAG_365520
Glucosamine-6-phosphate isomerase family protein.
  
 
 0.642
TVAG_430670
Adenosine deaminase family protein.
    
 0.622
TVAG_416510
Adenosine deaminase family protein.
    
 0.622
TVAG_171610
HD domain containing protein.
  
  
 0.543
TVAG_066810
HAD-superfamily hydrolase, subfamily IIA containing protein.
  
     0.537
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.