STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_398510Clan CA, family C1, cathepsin F-like cysteine peptidase; Belongs to the peptidase C1 family. (137 aa)    
Predicted Functional Partners:
TVAG_427120
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.962
TVAG_267850
Clan CA, family C1, cathepsin L or K-like cysteine peptidase; Belongs to the peptidase C1 family.
  
0.938
TVAG_336300
Clan AA, family A1, cathepsin D-like aspartic peptidase; Belongs to the peptidase A1 family.
   
 0.928
TVAG_454200
Clan CA, family C1, cathepsin B-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.827
TVAG_040870
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.827
TVAG_052570
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.827
TVAG_427130
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.827
TVAG_218830
Clan CA, family C1, cathepsin L-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.827
TVAG_488380
Clan CA, family C1, cathepsin B-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.826
TVAG_126090
Clan CA, family C1, cathepsin L or H-like cysteine peptidase; Belongs to the peptidase C1 family.
  
 0.826
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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