STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_175210UDENN domain-containing protein. (466 aa)    
Predicted Functional Partners:
TVAG_126970
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.671
TVAG_292550
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.617
TVAG_093060
Ras family protein.
     
 0.592
TVAG_365580
RAS, putative.
     
 0.592
TVAG_388290
Ras family protein.
     
 0.592
TVAG_028730
Ras family protein.
     
 0.592
TVAG_286490
Small GTP-binding protein, putative.
     
 0.592
TVAG_193770
Ras family protein.
     
 0.592
TVAG_216900
Ras family protein.
     
 0.592
TVAG_421510
Small GTP-binding protein, putative.
     
 0.592
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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