STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_002210HECT domain-containing protein. (490 aa)    
Predicted Functional Partners:
TVAG_351910
RanBP1 domain containing protein.
   
 0.863
TVAG_080080
RanBP1 domain containing protein.
   
 0.863
TVAG_185080
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.857
TVAG_341140
Ras family protein.
    
 0.857
TVAG_327680
Uncharacterized protein.
   
 0.857
TVAG_472130
Protein kinase domain-containing protein.
    
 0.809
TVAG_025050
CAMK family protein kinase.
    
 0.809
TVAG_021440
Histone H2A; Belongs to the histone H2A family.
    
 0.788
TVAG_447860
Histone H2A; Belongs to the histone H2A family.
    
 0.788
TVAG_105970
Histone H2A; Belongs to the histone H2A family.
    
 0.788
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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