STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_32816026S proteasome regulatory subunit rpn10-related protein. (231 aa)    
Predicted Functional Partners:
TVAG_035330
Proteasome endopeptidase complex, putative; Belongs to the AAA ATPase family.
   
 0.993
TVAG_074870
Proteasome, putative; Belongs to the AAA ATPase family.
   
 0.993
TVAG_477530
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.991
TVAG_438030
PCI domain containing protein.
   
 0.991
TVAG_076170
PCI domain containing protein.
   
 0.990
TVAG_388670
PCI domain containing protein.
   
 0.990
TVAG_128250
Proteasome endopeptidase complex, putative; Belongs to the AAA ATPase family.
   
 0.990
TVAG_115420
Proteasome endopeptidase complex, putative; Belongs to the AAA ATPase family.
   
 0.989
TVAG_193070
PCI domain containing protein.
   
 0.984
TVAG_379960
PCI domain containing protein.
   
 0.984
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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