STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_360420Starch binding domain containing protein. (984 aa)    
Predicted Functional Partners:
TVAG_258220
Glycosyl transferase, group 1 family protein.
  
 
 0.967
TVAG_329700
Glycosyl hydrolases family 31 protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.960
TVAG_348330
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.936
TVAG_509780
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.936
TVAG_276310
1,4-alpha-glucan branching enzyme IIB, chloroplast, putative.
  
 
 0.935
TVAG_453180
Starch branching enzyme, putative.
  
 
 0.935
TVAG_014980
Glycosyl transferase family 8 protein.
     
  0.900
TVAG_185930
Alpha-amylase.
  
 
 0.887
TVAG_403690
Alpha-amylase.
  
 
 0.887
TVAG_316720
Alpha-amylase.
  
 
 0.887
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.