STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_155030Meiotic recombination protein DMC1/LIM15 homolog, putative; Belongs to the RecA family. (338 aa)    
Predicted Functional Partners:
TVAG_202100
Zinc finger, C2H2 type family protein.
  
 0.999
TVAG_168980
ANK_REP_REGION domain-containing protein.
   
 0.999
TVAG_144570
RECA_2 domain-containing protein.
  
0.999
TVAG_426440
Type III restriction enzyme, res subunit family protein.
   
 0.990
TVAG_325770
Type III restriction enzyme, res subunit family protein.
   
 0.990
TVAG_287330
Type III restriction enzyme, res subunit family protein.
   
 0.990
TVAG_473090
BRCA2 repeat family protein.
   
 0.987
TVAG_258950
Type IIB DNA topoisomerase family protein.
    
 0.977
TVAG_001380
XPG I-region family protein.
  
 0.975
TVAG_098295
Ser/Thr protein phosphatase, putative.
  
 0.972
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.