Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TVAG_038580 | TVAG_281750 | A2DY14 | A2E9P0 | DNA polymerase. | DNA polymerase. | 0.900 |
TVAG_038580 | TVAG_287330 | A2DY14 | A2G193 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_038580 | TVAG_325770 | A2DY14 | A2EWH8 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_038580 | TVAG_426440 | A2DY14 | A2DYR1 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_038580 | TVAG_538270 | A2DY14 | A2HRF1 | DNA polymerase. | DNA_pol_B_2 domain-containing protein. | 0.809 |
TVAG_160790 | TVAG_472580 | A2E4T4 | A2FU85 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
TVAG_160790 | TVAG_473940 | A2E4T4 | A2EQ40 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
TVAG_160790 | TVAG_477730 | A2E4T4 | A2G247 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Helicase conserved C-terminal domain containing protein. | 0.930 |
TVAG_160790 | TVAG_538270 | A2E4T4 | A2HRF1 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | DNA_pol_B_2 domain-containing protein. | 0.814 |
TVAG_281750 | TVAG_038580 | A2E9P0 | A2DY14 | DNA polymerase. | DNA polymerase. | 0.900 |
TVAG_281750 | TVAG_287330 | A2E9P0 | A2G193 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_281750 | TVAG_325770 | A2E9P0 | A2EWH8 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_281750 | TVAG_426440 | A2E9P0 | A2DYR1 | DNA polymerase. | Type III restriction enzyme, res subunit family protein. | 0.935 |
TVAG_281750 | TVAG_538270 | A2E9P0 | A2HRF1 | DNA polymerase. | DNA_pol_B_2 domain-containing protein. | 0.809 |
TVAG_287330 | TVAG_038580 | A2G193 | A2DY14 | Type III restriction enzyme, res subunit family protein. | DNA polymerase. | 0.935 |
TVAG_287330 | TVAG_281750 | A2G193 | A2E9P0 | Type III restriction enzyme, res subunit family protein. | DNA polymerase. | 0.935 |
TVAG_287330 | TVAG_325770 | A2G193 | A2EWH8 | Type III restriction enzyme, res subunit family protein. | Type III restriction enzyme, res subunit family protein. | 0.991 |
TVAG_287330 | TVAG_426440 | A2G193 | A2DYR1 | Type III restriction enzyme, res subunit family protein. | Type III restriction enzyme, res subunit family protein. | 0.990 |
TVAG_287330 | TVAG_496910 | A2G193 | A2GCE4 | Type III restriction enzyme, res subunit family protein. | Protein kinase, putative. | 0.938 |
TVAG_287330 | TVAG_538270 | A2G193 | A2HRF1 | Type III restriction enzyme, res subunit family protein. | DNA_pol_B_2 domain-containing protein. | 0.826 |
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