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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuCHigh-affinity Zn transport protein (ABC superfamily, atp_bind); Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (248 aa)    
Predicted Functional Partners:
znuB
High-affinity Zn transport protein (ABC superfamily, membrane); COG1108.
 
 0.999
znuA
High-affinity Zn transport protein (ABC superfamily, peri_bind); COG4531; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.997
yfeD
Chelated iron ABC transporter, permease protein; COG1108.
 
 
 0.777
yfeA
Chelated iron ABC transporter, periplasmic iron binding protein; COG0803; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.776
yfeC
Chelated iron transport system membrane protein; COG1108.
  
 
 0.747
ubiB
2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
      0.702
HDEF_0652
Putative M23 peptidase family protein; COG0739.
  
    0.531
lpxM
Myristoyl-acyl carrier protein (ACP)-dependent acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.
 
     0.461
fur
Transcriptional repressor of iron transport (Fur family); COG0735; Belongs to the Fur family.
  
  
 0.412
evgS
Hybrid sensory histidine kinase in two-component regulatory system with EvgA, regulates multidrug resistance.
     
 0.407
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
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