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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traOTraO conjugal transfer protein. (391 aa)    
Predicted Functional Partners:
traU
TraU conjugal transfer protein.
  
  
 0.895
traN
TraN conjugal transfer protein.
   
 
 0.862
HDEF_0969
Hypothetical protein.
       0.773
traM_1
TraM conjugal transfer protein.
       0.768
virB9
VirB9 conjugative transfer protein.
  
 
 0.751
triH
TriH conjugal transfer protein.
  
 
 0.751
traL
TraL conjugal transfer protein.
       0.683
triG
TriG conjugal transfer protein.
  
  
 0.599
traW
TraW conjugal transfer protein.
       0.596
traX
TraX conjugal transfer protein.
       0.596
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.